The last decades have been characterized by unprecedented technological advances, many of them powered by modern technologies such as Artificial Intelligence (AI) and Machine Learning (ML). The world has become more digitally connected than ever, but we face major challenges. One of the most significant is cybercrime, which has emerged as a global threat to governments, businesses, and civil societies. The pervasiveness of digital technologies combined with a constantly shifting technological foundation has created a complex and powerful playground for cybercriminals, which triggered a surge in demand for intelligent threat detection systems based on machine and deep learning. This paper investigates AI-based cyber threat detection to protect our modern digital ecosystems. The primary focus is on evaluating ML-based classifiers and ensembles for anomaly-based malware detection and network intrusion detection and how to integrate those models in the context of network security, mobile security, and IoT security. The discussion highlights the challenges when deploying and integrating AI-enabled cybersecurity solutions into existing enterprise systems and IT infrastructures, including options to overcome those challenges. Finally, the paper provides future research directions to further increase the security and resilience of our modern digital industries, infrastructures, and ecosystems.